As next-generation sequencing becomes more time- and cost-efficient, scaling up to hundreds of samples in a single experiment, it becomes vital to have software that can transform that information into a readily usable format for the scientist. Our easy-to-use solutions are designed for researchers with all levels of bioinformatics experience—from those analyzing their first sequencing dataset to experts in the field.
The products below represent our current portfolio of bioinformatics pipelines, designed to analyze sequencing results from specific reagent applications with programs tailored to accommodate the kit. Please view each product's page for more information about the pipeline and the Takara Bio kit it complements.
Cogent NGS Analysis Pipeline takes input data from sequencing and a well-list file and outputs an HTML report and other files, such as a gene matrix, to continue further analysis.
Cogent NGS Discovery Software is bioinformatic software for user-friendly analysis of sequencing data derived from Takara Bio's ICELL8 single-cell systems and select UMI kits.
The SMART-Seq DE3 Demultiplexer software is only for use with the sequencing data generated with the SMART-Seq v4 3′ DE Kit. CLC Genomics can also be used for demultiplexing.
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